BLAST Caenorhabditis.org

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Advanced Parameters:

Nucleotide databases

CDS databases

All
- Caenorhabditis afra JU1286 v1 cds
- Caenorhabditis angaria PS1010 PRJNA51225 cds
- Caenorhabditis brenneri C brenneri 6.0.1 b cds
- Caenorhabditis briggsae CB4 cds
- Caenorhabditis castelli JU1956 v1 cds
- Caenorhabditis doughertyi JU1771 v1 cds
- Caenorhabditis elegans WBcel235 cds
- Caenorhabditis japonica C japonica 7.0.1 cds
- Caenorhabditis kamaaina QG2077 v1 cds
- Caenorhabditis latens PX534 v1 cds
- Caenorhabditis monodelphis JU1667 v1 cds
- Caenorhabditis nouraguensis JU2079 v1 cds
- Caenorhabditis plicata SB355 v1 cds
- Caenorhabditis remanei PX439 v1 cds
- Caenorhabditis sinica JU800 v1 cds
- Caenorhabditis sp21 NIC534 v1 cds
- Caenorhabditis sp26 JU2190 v1 cds
- Caenorhabditis sp28 QG2080 v1 cds
- Caenorhabditis sp29 QG2083 v1 cds
- Caenorhabditis sp31 JU2585 v1 cds
- Caenorhabditis sp32 JU2788 v1 cds
- Caenorhabditis sp34 NK74SC v710.cds
- Caenorhabditis sp34 NK74SC v710 cds
- Caenorhabditis sp38 JU2809 v1 cds
- Caenorhabditis sp39 NIC564 v1 cds
- Caenorhabditis sp40 JU2818 v1 cds
- Caenorhabditis tropicalis JU1373 301 cds
- Caenorhabditis virilis JU1968 v1 cds
- Diploscapter coronatus PDL0010 v1 cds
- Heterorhabditis bacteriophora M31e PRJNA13977 cds
- Mesorhabditis belari JU2817 v2 cds
- Oscheius tipulae CEW1 nOt2 cds
- Poikilolaimus oxycercus v1 cds

Scaffold databases

All
- Caenorhabditis afra JU1286 v1 scaffolds
- Caenorhabditis angaria PS1010 PRJNA51225 scaffolds
- Caenorhabditis brenneri C brenneri 6.0.1 b scaffolds
- Caenorhabditis briggsae CB4 scaffolds
- Caenorhabditis castelli JU1956 v1 scaffolds
- Caenorhabditis doughertyi JU1771 v1 scaffolds
- Caenorhabditis elegans WBcel235 scaffolds
- Caenorhabditis japonica C japonica 7.0.1 scaffolds
- Caenorhabditis kamaaina QG2077 v1 scaffolds
- Caenorhabditis latens PX534 v1 scaffolds
- Caenorhabditis monodelphis JU1667 v1 scaffolds
- Caenorhabditis nouraguensis JU2079 v1 scaffolds
- Caenorhabditis plicata SB355 v1 scaffolds
- Caenorhabditis remanei PX439 v1 scaffolds
- Caenorhabditis sinica JU800 v1 scaffolds
- Caenorhabditis sp21 NIC534 v1 scaffolds
- Caenorhabditis sp26 JU2190 v1 scaffolds
- Caenorhabditis sp28 QG2080 v1 scaffolds
- Caenorhabditis sp29 QG2083 v1 scaffolds
- Caenorhabditis sp31 JU2585 v1 scaffolds
- Caenorhabditis sp32 JU2788 v1 scaffolds
- Caenorhabditis sp34 NK74SC v710.scaffolds
- Caenorhabditis sp34 NK74SC v710 scaffolds
- Caenorhabditis sp38 JU2809 v1 scaffolds
- Caenorhabditis sp39 NIC564 v1 scaffolds
- Caenorhabditis sp40 JU2818 v1 scaffolds
- Caenorhabditis tropicalis JU1373 301 scaffolds
- Caenorhabditis virilis JU1968 v1 scaffolds
- Diploscapter coronatus PDL0010 v1 scaffolds
- Heterorhabditis bacteriophora M31e PRJNA13977 scaffolds
- Mesorhabditis belari JU2817 v2 scaffolds
- Oscheius tipulae CEW1 nOt2 scaffolds
- Poikilolaimus oxycercus v1 scaffolds

Protein databases

All
- Caenorhabditis afra JU1286 v1 proteins
- Caenorhabditis angaria PS1010 PRJNA51225 proteins
- Caenorhabditis brenneri C brenneri 6.0.1 b proteins
- Caenorhabditis briggsae CB4 proteins
- Caenorhabditis castelli JU1956 v1 proteins
- Caenorhabditis doughertyi JU1771 v1 proteins
- Caenorhabditis elegans WBcel235 proteins
- Caenorhabditis japonica C japonica 7.0.1 proteins
- Caenorhabditis kamaaina QG2077 v1 proteins
- Caenorhabditis latens PX534 v1 proteins
- Caenorhabditis monodelphis JU1667 v1 proteins
- Caenorhabditis nouraguensis JU2079 v1 proteins
- Caenorhabditis plicata SB355 v1 proteins
- Caenorhabditis remanei PX439 v1 proteins
- Caenorhabditis sinica JU800 v1 proteins
- Caenorhabditis sp21 NIC534 v1 proteins
- Caenorhabditis sp26 JU2190 v1 proteins
- Caenorhabditis sp28 QG2080 v1 proteins
- Caenorhabditis sp29 QG2083 v1 proteins
- Caenorhabditis sp31 JU2585 v1 proteins
- Caenorhabditis sp32 JU2788 v1 proteins
- Caenorhabditis sp34 NK74SC v710.proteins
- Caenorhabditis sp34 NK74SC v710 proteins
- Caenorhabditis sp38 JU2809 v1 proteins
- Caenorhabditis sp39 NIC564 v1 proteins
- Caenorhabditis sp40 JU2818 v1 proteins
- Caenorhabditis tropicalis JU1373 301 proteins
- Caenorhabditis virilis JU1968 v1 proteins
- Diploscapter coronatus PDL0010 v1 proteins
- Heterorhabditis bacteriophora M31e PRJNA13977 proteins
- Mesorhabditis belari JU2817 v2 proteins
- Oscheius tipulae CEW1 nOt2 proteins
- Poikilolaimus oxycercus v1 proteins

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Please Cite
SequenceServer: Priyam et al. (2015) Sequenceserver: a modern graphical user interface for custom BLAST databases. biorxiv doi: 10.1101/033142.
caenorhabditis: blast.caenorhabditis.org
& relevant data sources.